Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADD69726.1TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: gur:Gura_4257 ParB-like partition protein; SMART: ParB domain protein nuclease; Belongs to the ParB family. (280 aa)    
Predicted Functional Partners:
ADD69725.1
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: geo:Geob_0454 cobyrinic acid ac-diamide synthase.
 
 0.998
ADD69480.1
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: pen:PSEEN5552 chromosome partitioning ATPase ParA.
 
 0.958
ADD69749.1
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: csa:Csal_1494 cobyrinic acid a,c-diamide synthase.
 
 0.941
ADD69727.1
PFAM: protein of unknown function DUF583; KEGG: pca:Pcar_3137 hypothetical protein.
     
 0.824
ADD69509.1
KEGG: gur:Gura_4392 cell divisionFtsK/SpoIIIE; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: AAA ATPase.
  
  
 0.819
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
       0.817
rsmG
Methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.798
ADD69729.1
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
       0.790
ADD69730.1
PFAM: extracellular solute-binding protein family 5; KEGG: sat:SYN_00608 oligopeptide-binding protein.
       0.783
ADD69731.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: glo:Glov_2033 binding-protein-dependent transport systems inner membrane component.
       0.754
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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