Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADD69730.1PFAM: extracellular solute-binding protein family 5; KEGG: sat:SYN_00608 oligopeptide-binding protein. (552 aa)    
Predicted Functional Partners:
ADD69731.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: glo:Glov_2033 binding-protein-dependent transport systems inner membrane component.
 0.999
ADD69732.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gsu:GSU1435 peptide ABC transporter, permease protein.
 0.999
ADD69266.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvm:DvMF_1827 binding-protein-dependent transport systems inner membrane component.
 0.989
ADD69267.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dal:Dalk_1533 binding-protein-dependent transport systems inner membrane component.
 0.986
ADD68519.1
KEGG: maq:Maqu_0452 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 0.975
ADD69265.1
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: dat:HRM2_49230 OppD; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 0.968
ADD69264.1
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: maq:Maqu_0453 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 0.962
ADD68341.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dds:Ddes_1030 binding-protein-dependent transport systems inner membrane component.
 
 0.957
ADD68342.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvm:DvMF_2401 nickel transporter permease NikB.
 
 0.947
ADD69268.1
PFAM: extracellular solute-binding protein family 5; KEGG: dde:Dde_0275 oligopeptide/dipeptide ABC transporter, periplasmic oligopeptide/dipeptide-binding protein.
     
 
0.900
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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