Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
ADD69736.1PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: dal:Dalk_0380 potassium transporter peripheral membrane component. (448 aa)    
Predicted Functional Partners:
ADD69735.1
KEGG: dde:Dde_2029 K+ transporter trk; TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter.
 
 
 0.987
ADD69734.1
KEGG: gme:Gmet_0119 hydrogenase maturation protein HypF; TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC domain; zinc finger HypF domain protein.
       0.816
ADD68055.1
H(+)-transporting two-sector ATPase; KEGG: dps:DP0973 V-type sodium ATP synthase, subunit J; PFAM: cation transporter.
  
 
 0.729
ADD69737.1
PFAM: Fmu (Sun) domain protein; KEGG: vsp:VS_1411 rRNA (cytosine-C(5)-)- methyltransferase RsmF; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
    0.691
ADD69499.1
PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: rpa:RPA0030 Sun/nucleolar Nop1/Nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
   0.650
ADD69733.1
Putative signal transduction protein; PFAM: Metal-dependent hydrolase HDOD; KEGG: dma:DMR_27280 response regulator receiver protein.
       0.608
ADD69738.1
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: dol:Dole_2204 hypothetical protein.
       0.558
ADD69739.1
KEGG: dol:Dole_2202 hypothetical protein.
       0.558
ADD69740.1
PFAM: acylphosphatase; KEGG: scl:sce7933 acylphosphatase.
       0.558
ADD66948.1
KEGG: pca:Pcar_2942 molybdopterin converting factor, large subunit.
   
    0.546
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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