STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD69739.1KEGG: dol:Dole_2202 hypothetical protein. (478 aa)    
Predicted Functional Partners:
ADD69738.1
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: dol:Dole_2204 hypothetical protein.
 
   
 0.955
ADD69737.1
PFAM: Fmu (Sun) domain protein; KEGG: vsp:VS_1411 rRNA (cytosine-C(5)-)- methyltransferase RsmF; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
       0.820
ADD69740.1
PFAM: acylphosphatase; KEGG: scl:sce7933 acylphosphatase.
       0.776
ADD69609.1
KEGG: geo:Geob_2165 PBS lyase heat domain protein repeat-containing protein; PFAM: PBS lyase HEAT domain protein repeat- containing protein; SMART: PBS lyase HEAT domain protein repeat- containing protein.
  
     0.640
ADD69381.1
PFAM: outer membrane porin; KEGG: spc:Sputcn32_3385 outer membrane porin.
  
     0.621
ADD68417.1
PFAM: outer membrane porin; KEGG: spc:Sputcn32_3385 outer membrane porin.
  
     0.610
ADD68863.1
PFAM: outer membrane porin; KEGG: sbm:Shew185_1155 outer membrane porin.
  
     0.607
ADD68856.1
PFAM: outer membrane porin; KEGG: sbm:Shew185_1155 outer membrane porin.
  
     0.585
ADD68838.1
Hypothetical protein; KEGG: nis:NIS_1591 sulfonate/nitrate ABC transporter, substrate-binding protein.
  
     0.570
ADD69736.1
PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: dal:Dalk_0380 potassium transporter peripheral membrane component.
       0.562
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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