STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kkor_0207Fe(II) trafficking protein YggX; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. (91 aa)    
Predicted Functional Partners:
Kkor_0208
A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.
 
  
 0.909
Kkor_0209
PFAM: TrkA-C domain protein; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: sfr:Sfri_0290 TrkA-C domain protein.
       0.607
Kkor_0671
PFAM: Stringent starvation protein B; KEGG: sspB; stringent starvation protein B; K03600 stringent starvation protein B.
  
     0.585
ftsB
Septum formation initiator; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.
  
     0.520
Kkor_2431
Bis(5'nucleosyl)-tetraphosphatase, ApaH; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
  
     0.514
Kkor_0743
TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: mmw:Mmwyl1_1085 glycine cleavage T protein (aminomethyl transferase); Belongs to the GcvT family.
  
   
 0.503
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
       0.465
rpiA
Ribose 5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
  
     0.447
cca
Polynucleotide adenylyltransferase/metal dependent phosphohydrolase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases.
  
     0.428
Your Current Organism:
Kangiella koreensis
NCBI taxonomy Id: 523791
Other names: K. koreensis DSM 16069, Kangiella koreensis DSM 16069, Kangiella koreensis JCM 12318, Kangiella koreensis KCTC 12183, Kangiella koreensis SW-125, Kangiella koreensis str. DSM 16069, Kangiella koreensis strain DSM 16069
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