STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kkor_0383PFAM: protein of unknown function DUF885; KEGG: cps:CPS_3202 putative lipoprotein. (643 aa)    
Predicted Functional Partners:
Kkor_0382
PFAM: protein of unknown function DUF520; KEGG: aha:AHA_1129 nucleotide-binding protein; Belongs to the UPF0234 family.
       0.465
Kkor_0384
Hypothetical protein.
       0.434
Kkor_0375
PFAM: peptidase M28; peptidase M20; KEGG: cps:CPS_2188 M23B family peptidase.
 
     0.425
Your Current Organism:
Kangiella koreensis
NCBI taxonomy Id: 523791
Other names: K. koreensis DSM 16069, Kangiella koreensis DSM 16069, Kangiella koreensis JCM 12318, Kangiella koreensis KCTC 12183, Kangiella koreensis SW-125, Kangiella koreensis str. DSM 16069, Kangiella koreensis strain DSM 16069
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.