STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kkor_0387PFAM: Aldehyde Dehydrogenase; KEGG: mxa:MXAN_0921 2-aminomuconic semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (481 aa)    
Predicted Functional Partners:
Kkor_0379
PFAM: amidohydrolase 2; KEGG: acmsd; aminocarboxymuconate semialdehyde decarboxylase.
 
 0.960
Kkor_0381
PFAM: Endoribonuclease L-PSP; KEGG: mxa:MXAN_0920 2-aminomuconate deaminase.
 
 
 0.931
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
    
 0.901
Kkor_0388
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bba:Bd0506 putative short-chain dehydrogenase/reductase.
   0.751
Kkor_2154
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
 
 
0.445
Kkor_0389
Hypothetical protein.
       0.433
Kkor_0859
TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: histidine biosynthesis protein; phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; KEGG: sus:Acid_3849 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerase; Belongs to the HisA/HisF family.
  
  
 0.432
Kkor_0242
PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: hch:HCH_06139 ATPase of the AAA+ class.
    
  0.427
Kkor_1393
PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD- dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: asa:ASA_0950 NADH:flavin oxidoreductase/NADH oxidase.
  
 
 0.426
kmo
Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily.
  
 
 0.425
Your Current Organism:
Kangiella koreensis
NCBI taxonomy Id: 523791
Other names: K. koreensis DSM 16069, Kangiella koreensis DSM 16069, Kangiella koreensis JCM 12318, Kangiella koreensis KCTC 12183, Kangiella koreensis SW-125, Kangiella koreensis str. DSM 16069, Kangiella koreensis strain DSM 16069
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