STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kkor_0402PFAM: protein of unknown function DUF74; KEGG: mmr:Mmar10_0837 hypothetical protein; Belongs to the UPF0145 family. (109 aa)    
Predicted Functional Partners:
Kkor_0403
Hypothetical protein.
       0.773
Kkor_0401
KEGG: bpy:Bphyt_1785 putative transmembrane anti- sigma factor.
       0.735
Kkor_0400
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: pfo:Pfl01_3666 sigma-24 (FecI); Belongs to the sigma-70 factor family. ECF subfamily.
       0.732
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
       0.560
Kkor_0399
PFAM: Glutathione S-transferase domain; KEGG: abo:ABO_2425 glutathione S-transferase; Belongs to the GST superfamily.
       0.469
Kkor_0398
KEGG: saz:Sama_3586 membrane protein.
       0.455
Your Current Organism:
Kangiella koreensis
NCBI taxonomy Id: 523791
Other names: K. koreensis DSM 16069, Kangiella koreensis DSM 16069, Kangiella koreensis JCM 12318, Kangiella koreensis KCTC 12183, Kangiella koreensis SW-125, Kangiella koreensis str. DSM 16069, Kangiella koreensis strain DSM 16069
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.