STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kkor_0593KEGG: spl:Spea_3565 hypothetical protein. (340 aa)    
Predicted Functional Partners:
Kkor_0592
PFAM: protein of unknown function DUF461; KEGG: mlo:mll3326 hypothetical protein.
       0.668
Kkor_0797
PFAM: glutaredoxin 2; KEGG: vsp:VS_1425 hypothetical protein.
  
     0.612
oadG
Sodium pump decarboxylase, gamma subunit; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation.
  
     0.533
Kkor_0214
KEGG: shl:Shal_1168 hypothetical protein.
  
     0.521
Kkor_1985
KEGG: pau:PA14_24380 hypothetical protein.
  
     0.517
Kkor_2374
KEGG: xac:XAC1374 hypothetical protein.
  
     0.515
Kkor_1818
PFAM: RDD domain containing protein; KEGG: vch:VC2498 hypothetical protein.
  
     0.466
Kkor_0591
PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: pzu:PHZ_c0313 fumarylacetoacetate hydrolase family protein.
       0.463
Kkor_2218
KEGG: mca:MCA2739 hypothetical protein.
  
     0.460
hflD
PFAM: protein of unknown function DUF489; KEGG: shm:Shewmr7_1677 hypothetical protein.
  
     0.421
Your Current Organism:
Kangiella koreensis
NCBI taxonomy Id: 523791
Other names: K. koreensis DSM 16069, Kangiella koreensis DSM 16069, Kangiella koreensis JCM 12318, Kangiella koreensis KCTC 12183, Kangiella koreensis SW-125, Kangiella koreensis str. DSM 16069, Kangiella koreensis strain DSM 16069
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.