STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kkor_0675PFAM: LppC family lipoprotein; KEGG: pae:PA4423 hypothetical protein. (612 aa)    
Predicted Functional Partners:
Kkor_2246
KEGG: swd:Swoo_0334 1A family penicillin-binding protein; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase.
  
 
 
 0.757
Kkor_0674
PFAM: protein of unknown function UPF0102; KEGG: psa:PST_1070 hypothetical protein; Belongs to the UPF0102 family.
     
 0.748
zipA
Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.
  
     0.733
lolB
Outer membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.
  
   
 0.727
gmhA
Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.
 
    0.718
Kkor_0165
PFAM: HemY domain protein; KEGG: hch:HCH_00288 uncharacterized enzyme of heme biosynthesis.
  
     0.699
Kkor_2260
PFAM: Sterol-binding domain protein; KEGG: cbd:CBUD_2119 hypothetical protein.
  
    0.685
Kkor_0672
PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: hsm:HSM_1204 transport-associated.
  
    0.684
rsmI
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.654
Kkor_1683
KEGG: ilo:IL1469 hypothetical protein.
  
     0.573
Your Current Organism:
Kangiella koreensis
NCBI taxonomy Id: 523791
Other names: K. koreensis DSM 16069, Kangiella koreensis DSM 16069, Kangiella koreensis JCM 12318, Kangiella koreensis KCTC 12183, Kangiella koreensis SW-125, Kangiella koreensis str. DSM 16069, Kangiella koreensis strain DSM 16069
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.