STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kkor_1116Beta-lytic metalloendopeptidase; KEGG: hch:HCH_03065 membrane protein related to metalloendopeptidase. (506 aa)    
Predicted Functional Partners:
Kkor_0311
PFAM: peptidase M4 thermolysin; Peptidase M4 thermolysin; Propeptide peptidase M4 and M36; peptidase domain protein; Propeptide PepSY amd peptidase M4; KEGG: aha:AHA_0851 elastase.
 
  
 0.829
Kkor_1115
KEGG: tbd:Tbd_1068 hypothetical protein.
       0.422
Kkor_2439
KEGG: sdn:Sden_0007 Na-Ca exchanger/integrin-beta4.
  
     0.415
Kkor_0515
KEGG: sfr:Sfri_3314 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; Peptidoglycan- binding LysM; SMART: cell wall hydrolase/autolysin; Peptidoglycan- binding LysM.
  
  
 0.408
Your Current Organism:
Kangiella koreensis
NCBI taxonomy Id: 523791
Other names: K. koreensis DSM 16069, Kangiella koreensis DSM 16069, Kangiella koreensis JCM 12318, Kangiella koreensis KCTC 12183, Kangiella koreensis SW-125, Kangiella koreensis str. DSM 16069, Kangiella koreensis strain DSM 16069
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.