STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kkor_1366PFAM: Na+/Picotransporter; KEGG: nis:NIS_1751 phosphate:Na+ symporter. (531 aa)    
Predicted Functional Partners:
Kkor_1367
PFAM: beta-lactamase domain protein; RNA- metabolising metallo-beta-lactamase; KEGG: hha:Hhal_0828 beta-lactamase domain protein.
       0.773
Kkor_1364
TIGRFAM: thymidine phosphorylase; PFAM: Pyrimidine nucleoside phosphorylase domain; Glycosyl transferase, family 3-like; KEGG: hch:HCH_01516 thymidine phosphorylase.
 
     0.752
Kkor_1363
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: aba:Acid345_0496 endonuclease/exonuclease/phosphatase.
 
     0.733
Kkor_1365
Ribose-phosphate pyrophosphokinase; KEGG: lpc:LPC_2256 phosphoribosylpyrophosphate synthetase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase.
       0.718
Kkor_1362
KEGG: hch:HCH_05358 hypothetical protein.
       0.588
Kkor_0116
TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: hch:HCH_06855 cation transport ATPase.
 
    0.459
Kkor_0273
PFAM: OmpA/MotB domain protein; KEGG: cja:CJA_1142 OmpA family protein.
  
  
 0.415
Your Current Organism:
Kangiella koreensis
NCBI taxonomy Id: 523791
Other names: K. koreensis DSM 16069, Kangiella koreensis DSM 16069, Kangiella koreensis JCM 12318, Kangiella koreensis KCTC 12183, Kangiella koreensis SW-125, Kangiella koreensis str. DSM 16069, Kangiella koreensis strain DSM 16069
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