STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kkor_1408PFAM: acyl-CoA dehydrogenase domain protein; KEGG: pae:PA4199 putative acyl-CoA dehydrogenase. (565 aa)    
Predicted Functional Partners:
Kkor_1978
Fatty acid oxidation complex, alpha subunit FadJ; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.971
Kkor_0013
Fatty oxidation complex, alpha subunit FadB; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.957
Kkor_1512
PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: rru:Rru_A3078 electron transfer flavoprotein.
 
 0.920
Kkor_1513
PFAM: Electron transfer flavoprotein alpha/beta- subunit; KEGG: mmr:Mmar10_2363 electron transfer flavoprotein beta-subunit.
 
 
 0.805
Kkor_1928
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sse:Ssed_0770 enoyl-CoA hydratase/isomerase.
 
 0.798
fadA
acetyl-CoA C-acyltransferase FadA; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed.
  
 0.739
Kkor_1060
acetyl-CoA acetyltransferase; KEGG: eba:ebA3639 putative acyl-CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.739
Kkor_1979
acetyl-CoA C-acyltransferase FadI; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed.
  
 0.739
Kkor_1057
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: gme:Gmet_3291 enoyl-CoA hydratase/isomerase.
 
 0.671
Kkor_1563
PFAM: AMP-dependent synthetase and ligase; KEGG: abu:Abu_1925 AMP-dependent synthetase and ligase.
 
 
 0.668
Your Current Organism:
Kangiella koreensis
NCBI taxonomy Id: 523791
Other names: K. koreensis DSM 16069, Kangiella koreensis DSM 16069, Kangiella koreensis JCM 12318, Kangiella koreensis KCTC 12183, Kangiella koreensis SW-125, Kangiella koreensis str. DSM 16069, Kangiella koreensis strain DSM 16069
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