STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kkor_2334KEGG: vsp:VS_II0370 hypothetical protein. (203 aa)    
Predicted Functional Partners:
Kkor_2333
PFAM: cytochrome oxidase assembly; KEGG: vha:VIBHAR_06265 hypothetical protein.
 
 
 0.965
Kkor_2335
KEGG: aeh:Mlg_0298 hypothetical protein.
 
  
 0.953
Kkor_0278
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.924
cyoE
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
  
 0.875
Kkor_2331
PFAM: electron transport protein SCO1/SenC; KEGG: ilo:IL0252 hypothetical protein.
 
     0.772
Kkor_0280
PFAM: cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: amc:MADE_04011 cytochrome c oxidase assembly protein.
 
 
 0.724
Kkor_2336
KEGG: tgr:Tgr7_3006 hypothetical protein.
       0.578
Kkor_0281
PFAM: cytochrome c oxidase subunit III; KEGG: abo:ABO_1897 cytochrome c oxidase, subunit III.
 
  
 0.558
Kkor_2337
KEGG: cps:CPS_4814 hypothetical protein.
       0.537
Kkor_1790
KEGG: pat:Patl_2384 hypothetical protein.
  
     0.536
Your Current Organism:
Kangiella koreensis
NCBI taxonomy Id: 523791
Other names: K. koreensis DSM 16069, Kangiella koreensis DSM 16069, Kangiella koreensis JCM 12318, Kangiella koreensis KCTC 12183, Kangiella koreensis SW-125, Kangiella koreensis str. DSM 16069, Kangiella koreensis strain DSM 16069
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