STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kkor_2379KEGG: hch:HCH_00333 hypothetical protein. (162 aa)    
Predicted Functional Partners:
Kkor_2376
PFAM: protein of unknown function DUF1365; KEGG: xca:xccb100_2967 hypothetical protein.
 
   
 0.817
Kkor_2377
PFAM: amine oxidase; KEGG: smt:Smal_1956 amine oxidase.
 
   
 0.778
Kkor_2380
KEGG: abo:ABO_0824 hypothetical protein.
       0.713
Kkor_2374
KEGG: xac:XAC1374 hypothetical protein.
 
   
 0.702
Kkor_2371
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: abo:ABO_0829 ColS.
 
     0.698
Kkor_2373
PFAM: protein of unknown function DUF1295; KEGG: aci:ACIAD1631 hypothetical protein.
 
     0.643
Kkor_2378
Stearoyl-CoA 9-desaturase; PFAM: fatty acid desaturase; KEGG: hch:HCH_00335 fatty-acid desaturase.
 
     0.629
Kkor_2372
PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: xac:XAC1372 hypothetical protein.
 
     0.620
Kkor_2375
PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: hch:HCH_00338 cyclopropane fatty acid synthase -like protein.
 
     0.583
Kkor_1776
PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; KEGG: Hypothetical protein CBG05158.
  
     0.563
Your Current Organism:
Kangiella koreensis
NCBI taxonomy Id: 523791
Other names: K. koreensis DSM 16069, Kangiella koreensis DSM 16069, Kangiella koreensis JCM 12318, Kangiella koreensis KCTC 12183, Kangiella koreensis SW-125, Kangiella koreensis str. DSM 16069, Kangiella koreensis strain DSM 16069
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