STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kkor_2592TIGRFAM: TonB family protein; KEGG: spc:Sputcn32_1521 TonB family protein. (268 aa)    
Predicted Functional Partners:
Kkor_1943
PFAM: MotA/TolQ/ExbB proton channel; KEGG: ilo:IL1858 TonB system biopolymer transport component.
 
 
 0.860
Kkor_1942
PFAM: MotA/TolQ/ExbB proton channel; KEGG: pha:PSHAa1189 TonB system transport protein ExbB2.
 
 
 0.851
Kkor_1939
SMART: Tetratricopeptide domain protein; KEGG: rce:RC1_0804 TPR domain protein.
 
     0.767
Kkor_1944
KEGG: rce:RC1_0799 TonB system biopolymer transport component, putative.
 
     0.756
Kkor_1154
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sde:Sde_3405 outer membrane protein.
 
   0.730
Kkor_2226
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: saz:Sama_1257 biopolymer transport protein ExbD/TolR.
 
   0.729
Kkor_2227
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: ilo:IL1856 biopolymer transport protein.
 
   0.717
Kkor_1941
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: amc:MADE_02811 biopolymer transport protein.
 
   0.683
Kkor_0677
KEGG: pha:PSHAa0470 hypothetical protein.
  
     0.648
Kkor_0777
KEGG: cja:CJA_2902 putative lipoprotein.
  
     0.636
Your Current Organism:
Kangiella koreensis
NCBI taxonomy Id: 523791
Other names: K. koreensis DSM 16069, Kangiella koreensis DSM 16069, Kangiella koreensis JCM 12318, Kangiella koreensis KCTC 12183, Kangiella koreensis SW-125, Kangiella koreensis str. DSM 16069, Kangiella koreensis strain DSM 16069
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