Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lebu_0262 | Lebu_0263 | Lebu_0262 | Lebu_0263 | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lpl:lp_0712 phosphonates ABC transporter, permease protein. | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lpl:lp_0713 phosphonates ABC transporter, permease protein. | 0.974 |
Lebu_0262 | Lebu_2277 | Lebu_0262 | Lebu_2277 | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lpl:lp_0712 phosphonates ABC transporter, permease protein. | KEGG: tde:TDE1356 putative lipoprotein. | 0.962 |
Lebu_0262 | phnC | Lebu_0262 | Lebu_0264 | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lpl:lp_0712 phosphonates ABC transporter, permease protein. | Phosphonate ABC transporter, ATPase subunit; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. | 0.993 |
Lebu_0263 | Lebu_0262 | Lebu_0263 | Lebu_0262 | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lpl:lp_0713 phosphonates ABC transporter, permease protein. | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lpl:lp_0712 phosphonates ABC transporter, permease protein. | 0.974 |
Lebu_0263 | Lebu_2277 | Lebu_0263 | Lebu_2277 | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lpl:lp_0713 phosphonates ABC transporter, permease protein. | KEGG: tde:TDE1356 putative lipoprotein. | 0.962 |
Lebu_0263 | phnC | Lebu_0263 | Lebu_0264 | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lpl:lp_0713 phosphonates ABC transporter, permease protein. | Phosphonate ABC transporter, ATPase subunit; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. | 0.995 |
Lebu_2277 | Lebu_0262 | Lebu_2277 | Lebu_0262 | KEGG: tde:TDE1356 putative lipoprotein. | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lpl:lp_0712 phosphonates ABC transporter, permease protein. | 0.962 |
Lebu_2277 | Lebu_0263 | Lebu_2277 | Lebu_0263 | KEGG: tde:TDE1356 putative lipoprotein. | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lpl:lp_0713 phosphonates ABC transporter, permease protein. | 0.962 |
Lebu_2277 | phnC | Lebu_2277 | Lebu_0264 | KEGG: tde:TDE1356 putative lipoprotein. | Phosphonate ABC transporter, ATPase subunit; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. | 0.987 |
phnC | Lebu_0262 | Lebu_0264 | Lebu_0262 | Phosphonate ABC transporter, ATPase subunit; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lpl:lp_0712 phosphonates ABC transporter, permease protein. | 0.993 |
phnC | Lebu_0263 | Lebu_0264 | Lebu_0263 | Phosphonate ABC transporter, ATPase subunit; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lpl:lp_0713 phosphonates ABC transporter, permease protein. | 0.995 |
phnC | Lebu_2277 | Lebu_0264 | Lebu_2277 | Phosphonate ABC transporter, ATPase subunit; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. | KEGG: tde:TDE1356 putative lipoprotein. | 0.987 |