STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lebu_0299PFAM: GCN5-related N-acetyltransferase; KEGG: cpy:Cphy_0287 GCN5-related N- acetyltransferase. (197 aa)    
Predicted Functional Partners:
Lebu_0300
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fma:FMG_1443 cobalt ABC transporter ATP- binding protein.
       0.648
pgk
PFAM: phosphoglycerate kinase; KEGG: lin:lin2552 phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
       0.550
Lebu_0301
Hypothetical protein.
       0.521
Lebu_0303
PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein; KEGG: lil:LA4133 Appr-1''-p processing enzyme family protein.
  
  
 0.476
Lebu_0302
KEGG: fnu:FN0994 hypothetical protein.
       0.445
Your Current Organism:
Leptotrichia buccalis
NCBI taxonomy Id: 523794
Other names: L. buccalis C-1013-b, Leptotrichia buccalis C-1013-b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.