Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Lebu_0850 | Lebu_0851 | TIGRFAM: hydroxymethylglutaryl-CoA reductase, degradative; KEGG: smu:SMU.942 putative hydroxymethylglutaryl- CoA reductase; Belongs to the HMG-CoA reductase family. | PFAM: transferase hexapeptide repeat containing protein; KEGG: cbe:Cbei_3719 maltose O-acetyltransferase. | 0.531 |
Lebu_0850 | Lebu_0852 | TIGRFAM: hydroxymethylglutaryl-CoA reductase, degradative; KEGG: smu:SMU.942 putative hydroxymethylglutaryl- CoA reductase; Belongs to the HMG-CoA reductase family. | KEGG: sgo:SGO_0244 hydroxymethylglutaryl-CoA synthase; TIGRFAM: hydroxymethylglutaryl-CoA synthase; PFAM: Hydroxymethylglutaryl-coenzyme A synthase domain; Hydroxymethylglutaryl-coenzyme A synthase domain protein. | 0.998 |
Lebu_0851 | Lebu_0850 | PFAM: transferase hexapeptide repeat containing protein; KEGG: cbe:Cbei_3719 maltose O-acetyltransferase. | TIGRFAM: hydroxymethylglutaryl-CoA reductase, degradative; KEGG: smu:SMU.942 putative hydroxymethylglutaryl- CoA reductase; Belongs to the HMG-CoA reductase family. | 0.531 |
Lebu_0851 | Lebu_0852 | PFAM: transferase hexapeptide repeat containing protein; KEGG: cbe:Cbei_3719 maltose O-acetyltransferase. | KEGG: sgo:SGO_0244 hydroxymethylglutaryl-CoA synthase; TIGRFAM: hydroxymethylglutaryl-CoA synthase; PFAM: Hydroxymethylglutaryl-coenzyme A synthase domain; Hydroxymethylglutaryl-coenzyme A synthase domain protein. | 0.689 |
Lebu_0851 | Lebu_0853 | PFAM: transferase hexapeptide repeat containing protein; KEGG: cbe:Cbei_3719 maltose O-acetyltransferase. | Hypothetical protein; KEGG: GH24749 gene product from transcript GH24749- RA. | 0.435 |
Lebu_0852 | Lebu_0850 | KEGG: sgo:SGO_0244 hydroxymethylglutaryl-CoA synthase; TIGRFAM: hydroxymethylglutaryl-CoA synthase; PFAM: Hydroxymethylglutaryl-coenzyme A synthase domain; Hydroxymethylglutaryl-coenzyme A synthase domain protein. | TIGRFAM: hydroxymethylglutaryl-CoA reductase, degradative; KEGG: smu:SMU.942 putative hydroxymethylglutaryl- CoA reductase; Belongs to the HMG-CoA reductase family. | 0.998 |
Lebu_0852 | Lebu_0851 | KEGG: sgo:SGO_0244 hydroxymethylglutaryl-CoA synthase; TIGRFAM: hydroxymethylglutaryl-CoA synthase; PFAM: Hydroxymethylglutaryl-coenzyme A synthase domain; Hydroxymethylglutaryl-coenzyme A synthase domain protein. | PFAM: transferase hexapeptide repeat containing protein; KEGG: cbe:Cbei_3719 maltose O-acetyltransferase. | 0.689 |
Lebu_0852 | Lebu_0853 | KEGG: sgo:SGO_0244 hydroxymethylglutaryl-CoA synthase; TIGRFAM: hydroxymethylglutaryl-CoA synthase; PFAM: Hydroxymethylglutaryl-coenzyme A synthase domain; Hydroxymethylglutaryl-coenzyme A synthase domain protein. | Hypothetical protein; KEGG: GH24749 gene product from transcript GH24749- RA. | 0.481 |
Lebu_0853 | Lebu_0851 | Hypothetical protein; KEGG: GH24749 gene product from transcript GH24749- RA. | PFAM: transferase hexapeptide repeat containing protein; KEGG: cbe:Cbei_3719 maltose O-acetyltransferase. | 0.435 |
Lebu_0853 | Lebu_0852 | Hypothetical protein; KEGG: GH24749 gene product from transcript GH24749- RA. | KEGG: sgo:SGO_0244 hydroxymethylglutaryl-CoA synthase; TIGRFAM: hydroxymethylglutaryl-CoA synthase; PFAM: Hydroxymethylglutaryl-coenzyme A synthase domain; Hydroxymethylglutaryl-coenzyme A synthase domain protein. | 0.481 |