STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lebu_1947Transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: npu:Npun_R4395 DeoR family transcriptional regulator. (249 aa)    
Predicted Functional Partners:
Lebu_0567
TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose- specific IIB subunit; phosphotransferase system EIIC; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: smu:SMU.872 putative PTS system, fructose- specific enzyme IIABC component.
 
  
 0.865
Lebu_0566
KEGG: cpf:CPF_0565 1-phosphofructokinase; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.717
Lebu_0586
KEGG: sgo:SGO_1517 tagatose-6-phosphate kinase; TIGRFAM: tagatose-6-phosphate kinase; 1- phosphofructokinase; PFAM: PfkB domain protein; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.690
Lebu_1946
TIGRFAM: PTS system, glucose subfamily, IIA subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; sugar- specific permease EIIA 1 domain; phosphotransferase system PTS EIIB protein; KEGG: emi:Emin_0921 PTS system, glucose-like IIB subunint.
  
  
 0.672
Lebu_1002
PTS modulated transcriptional regulator, MtlR family; PFAM: PRD domain protein; phosphoenolpyruvate- dependent sugar phosphotransferase system EIIA 2; Helix- turn-helix type 11 domain protein; KEGG: cbl:CLK_1607 PRD domain-containing protein.
  
  
 0.597
Lebu_1572
KEGG: cpf:CPF_2817 LacI family transcription regulator; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI.
  
  
 0.558
Lebu_1688
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: dno:DNO_0531 short-chain dehydrogenase/reductase family protein.
  
  
 0.492
Lebu_1973
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: fnu:FN0494 short chain dehydrogenase.
  
  
 0.492
Lebu_1908
PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: lac:LBA0500 msm operon repressor.
  
  
 0.472
Lebu_0181
Transcriptional regulator, RpiR family; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: lac:LBA1577 transcriptional regulator.
  
   
 0.456
Your Current Organism:
Leptotrichia buccalis
NCBI taxonomy Id: 523794
Other names: L. buccalis C-1013-b, Leptotrichia buccalis C-1013-b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.