Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EHY68984.1 | SBOV46981 | SEHO0A_00008 | SEHO0A_00009 | GPR1/FUN34/YaaH family protein; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM0009; yaaH. | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM0010; htgA. | 0.493 |
EHY68984.1 | yaaI | SEHO0A_00008 | SEHO0A_00010 | GPR1/FUN34/YaaH family protein; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM0009; yaaH. | Hypothetical protein; Locus tag in AE006468 is STM0011; yaaI; Belongs to the UPF0412 family. | 0.445 |
EHY68987.1 | SBOV46981 | SEHO0A_00011 | SEHO0A_00009 | Hypothetical protein. | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM0010; htgA. | 0.469 |
EHY68987.1 | dnaK_2 | SEHO0A_00011 | SEHO0A_00012 | Hypothetical protein. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.506 |
EHY68987.1 | yaaI | SEHO0A_00011 | SEHO0A_00010 | Hypothetical protein. | Hypothetical protein; Locus tag in AE006468 is STM0011; yaaI; Belongs to the UPF0412 family. | 0.540 |
SBOV46981 | EHY68984.1 | SEHO0A_00009 | SEHO0A_00008 | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM0010; htgA. | GPR1/FUN34/YaaH family protein; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM0009; yaaH. | 0.493 |
SBOV46981 | EHY68987.1 | SEHO0A_00009 | SEHO0A_00011 | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM0010; htgA. | Hypothetical protein. | 0.469 |
SBOV46981 | yaaI | SEHO0A_00009 | SEHO0A_00010 | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM0010; htgA. | Hypothetical protein; Locus tag in AE006468 is STM0011; yaaI; Belongs to the UPF0412 family. | 0.729 |
dnaK_2 | EHY68987.1 | SEHO0A_00012 | SEHO0A_00011 | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Hypothetical protein. | 0.506 |
dnaK_2 | yaaI | SEHO0A_00012 | SEHO0A_00010 | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Hypothetical protein; Locus tag in AE006468 is STM0011; yaaI; Belongs to the UPF0412 family. | 0.426 |
yaaI | EHY68984.1 | SEHO0A_00010 | SEHO0A_00008 | Hypothetical protein; Locus tag in AE006468 is STM0011; yaaI; Belongs to the UPF0412 family. | GPR1/FUN34/YaaH family protein; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM0009; yaaH. | 0.445 |
yaaI | EHY68987.1 | SEHO0A_00010 | SEHO0A_00011 | Hypothetical protein; Locus tag in AE006468 is STM0011; yaaI; Belongs to the UPF0412 family. | Hypothetical protein. | 0.540 |
yaaI | SBOV46981 | SEHO0A_00010 | SEHO0A_00009 | Hypothetical protein; Locus tag in AE006468 is STM0011; yaaI; Belongs to the UPF0412 family. | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM0010; htgA. | 0.729 |
yaaI | dnaK_2 | SEHO0A_00010 | SEHO0A_00012 | Hypothetical protein; Locus tag in AE006468 is STM0011; yaaI; Belongs to the UPF0412 family. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.426 |