STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHY68993.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM0016. (177 aa)    
Predicted Functional Partners:
EHY68994.1
Hypothetical protein; Locus tag in AE006468 is STM0017.
       0.743
EHY68995.1
Carbohydrate binding domain protein; KEGG: bxe:Bxe_A3196 1.1e-147 glycosyl hydrolase family chitinase; locus tag in AE006468 is STM0018.
 
     0.702
EHY70823.1
Hypothetical protein; Locus tag in AE006468 is STM1871.
  
     0.604
EHY67273.1
Hypothetical protein; Locus tag in AE006468 is STM4309.
 
     0.518
EHY68991.1
Transcriptional regulator, LysR family; Psort location: Cytoplasmic, score: 9.26; locus tag in AE006468 is STM0014; Belongs to the LysR transcriptional regulatory family.
  
     0.461
cadC
Transcriptional regulatory protein; KEGG: rle:RL2429 5.6e-09 cya; putative adenylate cyclase; locus tag in AE006468 is STM2557; cadC.
 
     0.411
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.