STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
leuOLeucine transcriptional activator; KEGG: bac:BamMC406_6375 1.2e-05 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM0115; leuO; Belongs to the LysR transcriptional regulatory family. (318 aa)    
Predicted Functional Partners:
chbR
Transcriptional regulator, AraC family; KEGG: lmh:LMHCC_0299 1.2e-09 methylphosphotriester-DNA alkyltransferase; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM1315; celD.
  
    0.679
EHY67532.1
Transcriptional regulator, LuxR family; Locus tag in AE006468 is STM4547; yjjQ.
  
  
 0.609
bglJ
Transcriptional regulator, LuxR family; Locus tag in AE006468 is STM4548; bglJ.
  
  
 0.596
EHY69076.1
Hypothetical protein.
       0.594
EHY68042.1
KEGG: mmw:Mmwyl1_2286 0.00043 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM3736; Belongs to the LysR transcriptional regulatory family.
  
     0.526
EHY69679.1
Pectinesterase; KEGG: sew:SeSA_A0936 2.9e-225 putative pectinesterase; Psort location: OuterMembrane, score: 9.93; locus tag in AE006468 is STM0786; ybhC.
  
     0.481
EHY69528.1
Ribonuclease I(RNase I) family protein; KEGG: sea:SeAg_B0657 1.1e-136 ribonuclease I K01169; Psort location: Periplasmic, score: 10.00; locus tag in AE006468 is STM0617; rna; Belongs to the RNase T2 family.
  
     0.442
sbmC
Bacterial transcription activator, effector binding domain protein; Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell.
  
     0.440
bcsE
KEGG: vfi:VF_A0886 1.1e-26 bcsE; hypothetical protein K01417; locus tag in AE006468 is STM3622; yhjS.
  
     0.421
EHY70483.1
KEGG: bxe:Bxe_B2247 3.5e-05 putative hexapeptide transferase family protein K00640; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM1610; ydcK.
  
     0.409
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.