STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHY69377.1Hypothetical protein; KEGG: sec:SC0496 1.0e-64 ybaW; hypothetical protein; K12500 thioesterase III; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM0454; ybaW. (132 aa)    
Predicted Functional Partners:
fadJ
Fatty oxidation complex, alpha subunit FadJ; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.688
fadB
Fatty oxidation complex, alpha subunit FadB; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.688
fabD
KEGG: spq:SPAB_02329 3.8e-159 acyl carrier protein S-malonyltransferase; K00645 [acyl-carrier-protein] S-malonyltransferase; Psort location: Cytoplasmic, score: 9.26; locus tag in AE006468 is STM1194; fabD.
  
 0.662
cof
Cof-like hydrolase; Catalyzes the hydrolysis of 4-amino-2-methyl-5- hydroxymethylpyrimidine pyrophosphate (HMP-PP) to 4-amino-2-methyl-5- hydroxymethylpyrimidine phosphate (HMP-P).
 
     0.549
EHY69430.1
GDSL-like lipase/acylhydrolase; KEGG: spt:SPA2216 1.6e-105 tesA; multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; K01048 lysophospholipase K10804; Psort location: Periplasmic, score: 9.99; locus tag in AE006468 is STM0506; tesA.
   
  
 0.537
EHY69376.1
Competence protein ComEA helix-hairpin-helix repeat region; KEGG: hor:Hore_06940 0.00018 glycogen/starch synthase, ADP-glucose type K00703; locus tag in AE006468 is STM0453; ybaV.
       0.531
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.460
iacP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 0.460
EHY67338.1
Phosphopantetheine attachment site.
  
 0.460
EHY68819.1
2,4-dienoyl-CoA reductase; KEGG: sea:SeAg_B3406 0. FAD/FMN-binding/pyridine nucleotide-disulphide oxidoreductase family protein; K00219 2,4-dienoyl-CoA reductase (NADPH2); Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM3219; fadH.
 
  
 0.442
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.