Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| rplM | rplS | SEHO0A_03433 | SEHO0A_02787 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.996 |
| rplM | rplT | SEHO0A_03433 | SEHO0A_01263 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.997 |
| rplM | rpmA | SEHO0A_03433 | SEHO0A_03392 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein L27; Psort location: Cytoplasmic, score: 9.26; locus tag in AE006468 is STM3303; rpmA; Belongs to the bacterial ribosomal protein bL27 family. | 0.998 |
| rplM | rpmB | SEHO0A_03433 | SEHO0A_03785 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein L28; Psort location: Cytoplasmic, score: 9.26; locus tag in AE006468 is STM3728; rpmB; Belongs to the bacterial ribosomal protein bL28 family. | 0.992 |
| rplM | rpmE2 | SEHO0A_03433 | SEHO0A_00426 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein L31; KEGG: ckp:ckrop_0375 0.0042 putative glutathione peroxidase; K00432 glutathione peroxidase; locus tag in AE006468 is STM0469; rpmE2. | 0.936 |
| rplM | rpmF | SEHO0A_03433 | SEHO0A_01078 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein L32; Psort location: Cytoplasmic, score: 9.26; locus tag in AE006468 is STM1191; rpmF; Belongs to the bacterial ribosomal protein bL32 family. | 0.987 |
| rplM | rpmI | SEHO0A_03433 | SEHO0A_01262 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein L35; Psort location: Cytoplasmic, score: 9.26; locus tag in AE006468 is STM1335; rpmI; Belongs to the bacterial ribosomal protein bL35 family. | 0.989 |
| rplM | rpsI | SEHO0A_03433 | SEHO0A_03432 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein S9; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM3344; rpsI; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
| rplM | rpsP | SEHO0A_03433 | SEHO0A_02790 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein S16; Locus tag in AE006468 is STM2676; rpsP; Belongs to the bacterial ribosomal protein bS16 family. | 0.994 |
| rplM | rpsT | SEHO0A_03433 | SEHO0A_00038 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.988 |
| rplS | rplM | SEHO0A_02787 | SEHO0A_03433 | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.996 |
| rplS | rplT | SEHO0A_02787 | SEHO0A_01263 | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.994 |
| rplS | rpmA | SEHO0A_02787 | SEHO0A_03392 | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | Ribosomal protein L27; Psort location: Cytoplasmic, score: 9.26; locus tag in AE006468 is STM3303; rpmA; Belongs to the bacterial ribosomal protein bL27 family. | 0.998 |
| rplS | rpmB | SEHO0A_02787 | SEHO0A_03785 | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | Ribosomal protein L28; Psort location: Cytoplasmic, score: 9.26; locus tag in AE006468 is STM3728; rpmB; Belongs to the bacterial ribosomal protein bL28 family. | 0.991 |
| rplS | rpmE2 | SEHO0A_02787 | SEHO0A_00426 | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | Ribosomal protein L31; KEGG: ckp:ckrop_0375 0.0042 putative glutathione peroxidase; K00432 glutathione peroxidase; locus tag in AE006468 is STM0469; rpmE2. | 0.937 |
| rplS | rpmF | SEHO0A_02787 | SEHO0A_01078 | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | Ribosomal protein L32; Psort location: Cytoplasmic, score: 9.26; locus tag in AE006468 is STM1191; rpmF; Belongs to the bacterial ribosomal protein bL32 family. | 0.989 |
| rplS | rpmI | SEHO0A_02787 | SEHO0A_01262 | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | Ribosomal protein L35; Psort location: Cytoplasmic, score: 9.26; locus tag in AE006468 is STM1335; rpmI; Belongs to the bacterial ribosomal protein bL35 family. | 0.986 |
| rplS | rpsI | SEHO0A_02787 | SEHO0A_03432 | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | Ribosomal protein S9; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM3344; rpsI; Belongs to the universal ribosomal protein uS9 family. | 0.993 |
| rplS | rpsP | SEHO0A_02787 | SEHO0A_02790 | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | Ribosomal protein S16; Locus tag in AE006468 is STM2676; rpsP; Belongs to the bacterial ribosomal protein bS16 family. | 0.999 |
| rplS | rpsT | SEHO0A_02787 | SEHO0A_00038 | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.981 |
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