STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHY69401.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM0479. (197 aa)    
Predicted Functional Partners:
EHY67845.1
Hypothetical protein; Locus tag in AE006468 is STM3508.
 
     0.895
EHY69400.1
Hypothetical protein; Locus tag in AE006468 is STM0479.
      0.797
EHY69403.1
Primosomal replication protein PriB and priC; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM0481; priC.
 
     0.686
arnF
Hypothetical protein; Translocates 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane; Belongs to the ArnF family.
  
     0.612
EHY69402.1
Hypothetical protein; Locus tag in AE006468 is STM0480; ybaM.
       0.576
SBOV07541
Hypothetical protein; Locus tag in AE006468 is STM0823; ybiJ.
  
     0.540
vapC
Toxin-antitoxin system, toxin component, PIN family; Toxic component of a toxin-antitoxin (TA) system. A site- specific tRNA-(fMet) endonuclease, it cleaves both charged and uncharged tRNA-(fMet) between positions 38 and 39 at the anticodon stem-loop boundary. Its toxic effects are neutralized by expression of cognate antitoxin VapB; Belongs to the PINc/VapC protein family.
  
     0.448
EHY70414.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM1544; pqaA.
  
     0.432
EHY69404.1
Putative inner membrane protein; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM0482; ybaN.
       0.415
EHY67539.1
DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown.
  
     0.405
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.