STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cueRKEGG: eci:UTI89_C3737 1.4e-17 zntR; zinc-responsive transcriptional regulator; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM0499; cueR. (138 aa)    
Predicted Functional Partners:
EHY69141.1
Tat pathway signal sequence; KEGG: eci:UTI89_C0136 9.0e-238 cueO; multicopper oxidase; Psort location: Periplasmic, score: 10.00; locus tag in AE006468 is STM0168; cueO.
 
  
 0.893
zntA
Cadmium-translocating P-type ATPase; KEGG: sea:SeAg_B3778 0. zntA; zinc/cadmium/mercury/lead-transporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM3576; zntA.
  
  
 0.821
EHY68587.1
Hypothetical protein; Locus tag in AE006468 is STM3023; yohL.
      
 0.819
EHY68918.1
Class II glutamine amidotransferase; KEGG: stt:t3247 0. gltB; glutamate synthase subunit alpha K00265; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM3330; gltB.
    
 0.774
copA
Copper-translocating P-type ATPase; KEGG: sty:STY0544 0. copA; copper exporting ATPase; K01533 Cu2+-exporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM0498; CopA.
  
  
 0.705
rpoD
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
 
 
 0.694
EHY71141.1
PAS domain S-box; KEGG: eci:UTI89_C2343 0. yegE; putative sensor protein; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM2123; yegE.
   
 0.687
arcB
PAS domain S-box; KEGG: sei:SPC_3398 0. arcB; aerobic respiration control sensor protein; K07648 two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM3328; arcB.
   
 0.620
nudE
Hydrolase, NUDIX family; KEGG: seh:SeHA_C3800 7.2e-94 nudE; ADP-ribose diphosphatase NudE K08312; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM3494; yrfE.
   
    0.574
EHY70254.1
Transcriptional regulator, MerR family; KEGG: eci:UTI89_C3737 1.4e-05 zntR; zinc-responsive transcriptional regulator; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM1390; orf242.
    
 
 0.564
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.