Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EHY69543.1 | crcB | SEHO0A_00580 | SEHO0A_00579 | Hydrolase, carbon-nitrogen family; KEGG: sea:SeAg_B0672 3.8e-120 hydrolase YbeM; locus tag in AE006468 is STM0631; ybeM. | CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | 0.538 |
EHY69543.1 | tatE | SEHO0A_00580 | SEHO0A_00581 | Hydrolase, carbon-nitrogen family; KEGG: sea:SeAg_B0672 3.8e-120 hydrolase YbeM; locus tag in AE006468 is STM0631; ybeM. | Twin arginine translocase protein E; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatE shares overlapping functions with TatA; Belongs to the TatA/E family. TatE subfamily. | 0.523 |
crcB | EHY69543.1 | SEHO0A_00579 | SEHO0A_00580 | CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | Hydrolase, carbon-nitrogen family; KEGG: sea:SeAg_B0672 3.8e-120 hydrolase YbeM; locus tag in AE006468 is STM0631; ybeM. | 0.538 |
crcB | tatE | SEHO0A_00579 | SEHO0A_00581 | CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | Twin arginine translocase protein E; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatE shares overlapping functions with TatA; Belongs to the TatA/E family. TatE subfamily. | 0.559 |
crcB | ybaX | SEHO0A_00579 | SEHO0A_00412 | CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | ExsB protein; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. | 0.537 |
tatE | EHY69543.1 | SEHO0A_00581 | SEHO0A_00580 | Twin arginine translocase protein E; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatE shares overlapping functions with TatA; Belongs to the TatA/E family. TatE subfamily. | Hydrolase, carbon-nitrogen family; KEGG: sea:SeAg_B0672 3.8e-120 hydrolase YbeM; locus tag in AE006468 is STM0631; ybeM. | 0.523 |
tatE | crcB | SEHO0A_00581 | SEHO0A_00579 | Twin arginine translocase protein E; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatE shares overlapping functions with TatA; Belongs to the TatA/E family. TatE subfamily. | CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | 0.559 |
ybaX | crcB | SEHO0A_00412 | SEHO0A_00579 | ExsB protein; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. | CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | 0.537 |