STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHY69587.1LysR substrate binding domain protein; KEGG: xau:Xaut_2936 1.6e-18 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM0692; Belongs to the LysR transcriptional regulatory family. (308 aa)    
Predicted Functional Partners:
tcuB
CitB domain protein; KEGG: afu:AF0661 1.2e-09 heterodisulfide reductase, subunit E, putative; K03390 heterodisulfide reductase subunit C; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM0690; citB.
 
 
 
 0.881
tcuA
Precorrin 3B synthase CobZ; KEGG: bpt:Bpet0773 1.3e-211 tricarballylate dehydrogenase; locus tag in AE006468 is STM0691.
 
   
 0.844
gbpR
LysR substrate binding domain protein; KEGG: met:M446_6823 2.3e-11 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.26; locus tag in AE006468 is STM2180; Belongs to the LysR transcriptional regulatory family.
  
     0.773
EHY70513.1
LysR substrate binding domain protein; KEGG: pmy:Pmen_2204 9.7e-10 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.26; locus tag in AE006468 is STM1625; ydcI; Belongs to the LysR transcriptional regulatory family.
  
     0.722
EHY71348.1
LysR substrate binding domain protein; KEGG: shn:Shewana3_3435 6.7e-20 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM2281; Belongs to the LysR transcriptional regulatory family.
  
     0.707
EHY70391.1
LysR substrate binding domain protein; KEGG: spe:Spro_4684 1.8e-13 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.26; locus tag in AE006468 is STM1523; yneJ; Belongs to the LysR transcriptional regulatory family.
  
     0.650
allS_2
LysR substrate binding domain protein; KEGG: ppf:Pput_4522 4.2e-12 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.26; locus tag in AE006468 is STM3020; Belongs to the LysR transcriptional regulatory family.
  
     0.641
hdfR
Transcriptional regulator, LysR family; Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon.
  
     0.585
EHY69583.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM0689; citA.
 
    0.562
EHY68802.1
LysR substrate binding domain protein; KEGG: ypy:YPK_1615 2.9e-74 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97; Belongs to the LysR transcriptional regulatory family.
  
     0.560
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.