STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pxpBHypothetical protein; KEGG: cvi:CV_3170 3.0e-56 carboxylase K01457; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM0712; ybgJ. (218 aa)    
Predicted Functional Partners:
EHY69613.1
Biotin-dependent carboxylase hypothetical protein; KEGG: dze:Dd1591_2921 7.6e-106 UreA amidolyase related protein; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM0713; ybgK.
 0.999
ybgL
LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
 
 0.999
EHY67873.1
Gamma-glutamyltransferase; KEGG: see:SNSL254_A3820 3.9e-292 ggt; gamma-glutamyltransferase K00681; Psort location: Periplasmic, score: 10.00; locus tag in AE006468 is STM3551; ggt.
   
 
  0.990
EHY68918.1
Class II glutamine amidotransferase; KEGG: stt:t3247 0. gltB; glutamate synthase subunit alpha K00265; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM3330; gltB.
   
 
  0.955
putA
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
   
 
  0.954
glnA
KEGG: sec:SC3899 3.4e-254 glnA; glutamine synthetase K01915; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM4007; glnA.
    
 0.916
gdhA_2
Glu/Leu/Phe/Val dehydrogenase, dimerization domain protein; KEGG: seh:SeHA_C1426 6.8e-240 gdhA; glutamate dehydrogenase; K00262 glutamate dehydrogenase (NADP+); Psort location: OuterMembrane, score: 9.92; locus tag in AE006468 is STM1299; gdhA; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
  0.912
EHY69611.1
Hypothetical protein; KEGG: hip:CGSHiEE_02770 1.1e-81 seryl-tRNA synthetase; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM0711; ybgI.
  
  
 0.810
kdgR
Transcriptional regulator, IclR family protein; Locus tag in AE006468 is STM1842; kdgR.
  
    0.642
EHY68661.1
IclR helix-turn-helix protein; Locus tag in AE006468 is STM3098.
  
    0.642
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.