STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHY69720.1Transporter, small conductance mechanosensitive ion channel family protein; KEGG: mla:Mlab_1701 2.3e-07 phosphoglycerate mutase K01834; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM0827; ybiO. (742 aa)    
Predicted Functional Partners:
EHY70557.1
Transporter, small conductance mechanosensitive ion channel family protein; KEGG: mla:Mlab_1701 1.2e-20 phosphoglycerate mutase K01834; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM1663; ynaI.
      
 0.830
EHY69866.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82; locus tag in AE006468 is STM0990; ycbC.
  
  
 0.807
EHY69679.1
Pectinesterase; KEGG: sew:SeSA_A0936 2.9e-225 putative pectinesterase; Psort location: OuterMembrane, score: 9.93; locus tag in AE006468 is STM0786; ybhC.
  
     0.675
EHY70483.1
KEGG: bxe:Bxe_B2247 3.5e-05 putative hexapeptide transferase family protein K00640; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM1610; ydcK.
  
     0.657
EHY69528.1
Ribonuclease I(RNase I) family protein; KEGG: sea:SeAg_B0657 1.1e-136 ribonuclease I K01169; Psort location: Periplasmic, score: 10.00; locus tag in AE006468 is STM0617; rna; Belongs to the RNase T2 family.
  
     0.627
ycdX
KEGG: vfi:VF_A0065 1.5e-52 putative hydrolase K04477; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM1136; ycdX; Belongs to the PHP family.
   
  
 0.606
sxy
TfoX protein; KEGG: hip:CGSHiEE_09150 0.00062 def; peptide deformylase K07343; locus tag in AE006468 is STM1072; yccR.
   
  
 0.603
EHY67532.1
Transcriptional regulator, LuxR family; Locus tag in AE006468 is STM4547; yjjQ.
  
     0.587
malM
Maltose operon periplasmic protein; Psort location: Periplasmic, score: 10.00; locus tag in AE006468 is STM4232; malM.
  
     0.570
glnP
KEGG: llm:llmg_1942 4.4e-29 glnP; glutamine ABC transporter permease and substrate binding protein K02029:K02030; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM0829; glnP.
  
    0.508
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.