STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHY69752.1Hypothetical protein; KEGG: bxe:Bxe_A4082 5.5e-29 citrate lyase; K01644 citrate lyase subunit beta; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM0854; Belongs to the HpcH/HpaI aldolase family. (171 aa)    
Predicted Functional Partners:
nifJ
KEGG: sew:SeSA_A1770 0. nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737; Psort location: CytoplasmicMembrane, score: 9.82; locus tag in AE006468 is STM1651; nifJ.
    
 0.977
EHY69754.1
Electron transfer flavoprotein FAD-binding domain protein; KEGG: fnu:FN1424 1.2e-20 acyl-CoA dehydrogenase, short-chain specific K00248; locus tag in AE006468 is STM0856.
  
    0.941
citF
KEGG: sew:SeSA_A0780 9.5e-266 citF; citrate lyase, alpha subunit K01643; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM0621; citF.
 
  
 0.930
citD
Citrate lyase acyl carrier protein; Covalent carrier of the coenzyme of citrate lyase.
 
 
 0.929
EHY69753.1
Electron transfer flavoprotein; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM0855.
  
    0.926
citX
holo-ACP synthase CitX; KEGG: ses:SARI_02315 1.2e-91 citX; 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA:apo-citrate lyase; K05964 holo-ACP synthase; locus tag in AE006468 is STM0620; citX.
 
  
 0.914
EHY69756.1
KEGG: stm:STM0857 2.5e-210 putative acyl-CoA dehydrogenase K00249; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM0857.
 
 
 0.904
citC
[citrate (pro-3S)-lyase] ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.
 
  
 0.890
EHY69755.1
Hypothetical protein.
 
 
 0.857
citG
KEGG: sew:SeSA_A0778 8.4e-155 citG; triphosphoribosyl-dephospho-CoA synthase K05966; locus tag in AE006468 is STM0619; citG.
 
  
 0.851
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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