STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rimKalpha-L-glutamate ligase, RimK family; Is an L-glutamate ligase that catalyzes the ATP-dependent post-translational addition of glutamate residues to the C-terminus of ribosomal protein S6 (RpsF). Is also able to catalyze the synthesis of poly-alpha-glutamate in vitro, via ATP hydrolysis from unprotected glutamate as substrate. The number of glutamate residues added to either RpsF or to poly-alpha-glutamate changes with pH. (300 aa)    
Predicted Functional Partners:
EHY69776.1
Hypothetical protein; Locus tag in AE006468 is STM0876; ybjN.
 
  
 0.930
mdfA
Transporter, major facilitator family protein; KEGG: shn:Shewana3_1692 6.2e-07 Xaa-His dipeptidase; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM0866; mdfA.
   
    0.876
EHY68918.1
Class II glutamine amidotransferase; KEGG: stt:t3247 0. gltB; glutamate synthase subunit alpha K00265; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM3330; gltB.
    
 0.802
nfsA
Nitroreductase family protein; KEGG: ses:SARI_02056 5.5e-112 nitroreductase A; K10678 nitroreductase; locus tag in AE006468 is STM0874; mdaA; Belongs to the flavin oxidoreductase frp family.
  
  
 0.734
EHY67502.1
Transporter, major facilitator family protein; Locus tag in AE006468 is STM4517; yjiO.
   
    0.617
mscS
Small-conductance mechanosensitive channel; KEGG: mla:Mlab_1701 3.1e-31 phosphoglycerate mutase K01834; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM3067; yggB.
 
     0.596
EHY69773.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82; locus tag in AE006468 is STM0873; ybjC.
  
  
 0.566
zntB
Zinc transporter; Mediates efflux of zinc ions; Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
 
     0.552
grxA
Glutaredoxin, GrxA family; KEGG: tcx:Tcr_0139 1.4e-07 glutaredoxin-like region; K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C); Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM0872; grxA.
    
 0.503
ybdK
Putative enzyme; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity.
    
 0.481
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.