STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ompFOuter membrane protein; KEGG: hip:CGSHiEE_02590 0.00018 nagA; N-acetylglucosamine-6-phosphate deacetylase; Psort location: OuterMembrane, score: 10.00; locus tag in AE006468 is STM0999; ompF; Belongs to the Gram-negative porin family. (363 aa)    
Predicted Functional Partners:
ompA
Outer membrane protein A; KEGG: rcm:A1E_04945 9.1e-06 gmk; guanylate kinase K03640; Psort location: OuterMembrane, score: 10.00; locus tag in AE006468 is STM1070; ompA; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.
  
 0.971
ompC_1
Psort location: OuterMembrane, score: 10.00; locus tag in AE006468 is STM2267; ompC; Belongs to the Gram-negative porin family.
  
  
0.949
tolC
Outer membrane channel protein; KEGG: ccv:CCV52592_0160 6.2e-15 fadD; long-chain-fatty-acid--CoA ligase K12340; Psort location: OuterMembrane, score: 10.00; locus tag in AE006468 is STM3186; tolC.
  
  
 0.941
lamB
LamB porin; Involved in the transport of maltose and maltodextrins. Belongs to the porin LamB (TC 1.B.3) family.
     
 0.928
bamA
Outer membrane protein assembly complex, YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Constitutes, with BamD, the core component of the assembly machinery.
  
 
 
 0.895
ompX
Hypothetical protein; Psort location: OuterMembrane, score: 10.00; locus tag in AE006468 is STM0833; ompX.
  
 
 0.889
ompR
Transcriptional regulatory protein OmpR; KEGG: pha:PSHAa2850 7.8e-97 ompR; osmolarity response regulator K07659; Psort location: Cytoplasmic, score: 10.00; locus tag in AE006468 is STM3502; ompR.
      
 0.854
EHY71212.1
TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 1.4e-38 sulfate/thiosulfate import ATP-binding protein CysA 2 (sulfate-transporting ATPase 2); Psort location: OuterMembrane, score: 10.00; locus tag in AE006468 is STM2199; cirA.
      
 0.851
EHY67838.1
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; KEGG: spq:SPAB_04357 1.1e-237 envZ; osmolarity sensor protein; K07638 two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM3501; envZ.
   
  
 0.833
tsx
Nucleoside-specific channel-forming protein Tsx; Psort location: OuterMembrane, score: 10.00; locus tag in AE006468 is STM0413; tsx.
   
 
 0.830
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.