STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHY70044.1Hypothetical protein. (43 aa)    
Predicted Functional Partners:
EHY70045.1
TonB-dependent siderophore receptor; KEGG: ccv:CCV52592_1811 4.6e-05 diaminopimelate epimerase (DAP epimerase); Psort location: OuterMembrane, score: 10.00; locus tag in AE006468 is STM1204; fhuE.
       0.572
EHY70046.1
Histidine triad domain protein; KEGG: seh:SeHA_C1319 4.1e-59 purine nucleoside phosphoramidase K12150; locus tag in AE006468 is STM1205; ycfF.
       0.432
EHY70047.1
Hypothetical protein; Locus tag in AE006468 is STM1206; ycfL.
       0.432
lpoB
Putative lipoprotein; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b). Belongs to the LpoB family.
       0.417
thiK
Thiamine kinase; Catalyzes the phosphorylation of thiamine to thiamine phosphate.
       0.417
nagZ
Glycosyl hydrolase family 3 protein; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.
       0.410
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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