STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ycfRHypothetical protein; KEGG: reu:Reut_B4338 0.0030 copper/zinc superoxide dismutase; K04565 Cu/Zn superoxide dismutase; locus tag in AE006468 is STM1214; ycfR. (85 aa)    
Predicted Functional Partners:
EHY68941.1
Hypothetical protein; KEGG: dtu:Dtur_1484 0.00090 pyridoxal biosynthesis lyase PdxS; K06215 pyridoxine biosynthesis protein; locus tag in AE006468 is STM3362.
  
  
 0.834
bhsA
Hypothetical protein; Locus tag in AE006468 is STM3361; yhcN.
  
  
 0.804
EHY67556.1
Putative protein smp; Locus tag in AE006468 is STM4577; smp.
  
     0.766
ftsN
Cell division protein FtsN; Essential cell division protein that activates septal peptidoglycan synthesis and constriction of the cell. Acts on both sides of the membrane, via interaction with FtsA in the cytoplasm and interaction with the FtsQBL complex in the periplasm. These interactions may induce a conformational switch in both FtsA and FtsQBL, leading to septal peptidoglycan synthesis by FtsI and associated synthases.
  
     0.765
EHY67539.1
DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown.
  
     0.764
EHY68836.1
Hypothetical protein; Locus tag in AE006468 is STM3231; yqjK.
  
     0.750
lpoB
Putative lipoprotein; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b). Belongs to the LpoB family.
  
     0.749
EHY70330.1
YdgA family protein; KEGG: hiq:CGSHiGG_01830 4.3e-32 proA; hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM1466; ydgA.
  
     0.743
mdoC
Putative glucans biosynthesis protein; Necessary for the succinyl substitution of periplasmic glucans. Could catalyze the transfer of succinyl residues from the cytoplasmic side of the membrane to the nascent glucan backbones on the periplasmic side of the membrane.
  
     0.727
rcsD
Hpt domain protein; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsD is a phosphotransfer intermediate between the sensor kinase RcsC and the response regulator RcsB. It acquires a phosphoryl group from RcsC and transfers it to RcsB.
  
     0.726
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.