STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yeaR_2Hypothetical protein; Locus tag in AE006468 is STM1271; yeaR. (120 aa)    
Predicted Functional Partners:
EHY70143.1
Putative protein YoaG; Locus tag in AE006468 is STM1272; yoaG.
  
  
 0.985
tehA_2
C4-dicarboxylate transporter/malic acid transport protein; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM1609; tehA.
  
   
 0.721
SBOV19971
Hypothetical protein; Locus tag in AE006468 is STM1936; yecH.
  
     0.718
csgE
Putative curli production assembly/transport component CsgE; Locus tag in AE006468 is STM1141; csgE.
  
     0.706
yehR
Lipofamily protein; Locus tag in AE006468 is STM2156; yehR.
  
     0.705
hmpA
Flavohemoprotein; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily.
  
  
 0.682
EHY69812.1
2Fe-2S iron-sulfur cluster binding domain protein; KEGG: sew:SeSA_A1053 5.7e-172 hcr; HCP oxidoreductase, NADH-dependent K11933; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM0936; hcr.
 
  
 0.679
hybE
Hydrogenase-2 operon family protein; Locus tag in AE006468 is STM3145; hybE.
 
    0.675
csgF
Putative curli production assembly/transport component CsgF; Locus tag in AE006468 is STM1140; csgF.
  
     0.672
EHY68152.1
Hypothetical protein; Locus tag in AE006468 is STM3848; yidZ.
  
     0.645
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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