STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHY70288.1Drug resistance transporter, Bcr/CflA family protein; KEGG: gdj:Gdia_1394 2.6e-06 sugar transporter; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM1428; ydhC. (401 aa)    
Predicted Functional Partners:
ydhB
LysR substrate binding domain protein; KEGG: cak:Caul_4844 8.1e-10 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.26; locus tag in AE006468 is STM1429; ydhB; Belongs to the LysR transcriptional regulatory family.
 
   
 0.702
EHY70787.1
Transporter, major facilitator family protein; Locus tag in AE006468 is STM1843.
  
  
 0.462
EHY68460.1
Transporter, major facilitator family protein; KEGG: fgr:FG00711.1 2.0e-12 hypothetical protein; K10866 DNA repair protein RAD50; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM2911.
  
   
 0.438
aaeA
Efflux transporter, RND family, MFP subunit; Forms an efflux pump with AaeB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
 
 0.422
EHY70287.1
KEGG: sei:SPC_2304 9.4e-211 cfa; cyclopropane fatty acyl phospholipid synthase; K00574 cyclopropane-fatty-acyl-phospholipid synthase; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM1427; cfa.
       0.419
mdtG
Transporter, major facilitator family protein; KEGG: efe:EFER_2667 6.2e-11 hexuronate transporter; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM1154; yceE.
  
  
 0.407
mlaE
Toluene tolerance protein Ttg2B; KEGG: cco:CCC13826_0092 8.4e-20 MTA/SAH nucleosidase K02066; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM3312; yrbE.
      
 0.400
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.