STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tusDNA replicatio site-binding protein; Trans-acting protein required for termination of DNA replication. Binds to DNA replication terminator sequences (terA to terF) to prevent the passage of replication forks. The termination efficiency will be affected by the affinity of this protein for the terminator sequence; Belongs to the Tus family. (309 aa)    
Predicted Functional Partners:
ompX
Hypothetical protein; Psort location: OuterMembrane, score: 10.00; locus tag in AE006468 is STM0833; ompX.
  
     0.772
bssS
Biofilm formation regulatory protein BssS; Locus tag in AE006468 is STM1161; yceP.
  
     0.771
EHY70047.1
Hypothetical protein; Locus tag in AE006468 is STM1206; ycfL.
  
     0.771
EHY70824.1
Hypothetical protein; Locus tag in AE006468 is STM1873.
  
     0.769
ynfB
Hypothetical protein; Locus tag in AE006468 is STM1503; ynfB; Belongs to the UPF0482 family.
  
     0.768
aaeX
Putative protein AaeX; Psort location: CytoplasmicMembrane, score: 9.82; locus tag in AE006468 is STM3366; yhcR.
  
     0.768
sseB
SseB protein; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM2535; sseB.
  
     0.766
atpI
KEGG: stt:t3647 7.4e-37 atpI; F0F1 ATP synthase subunit I K02116; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM3872; atpI.
  
     0.766
holE
DNA polymerase III subunit theta; Locus tag in AE006468 is STM1876; holE.
  
     0.765
SBOV20081
Hypothetical protein; Locus tag in AE006468 is STM1949; yecF.
  
     0.763
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.