STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sra30S ribosomal subunit S22; Psort location: Cytoplasmic, score: 9.26; locus tag in AE006468 is STM1565; rpsV. (47 aa)    
Predicted Functional Partners:
dps
Ferritin-like domain protein; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction; Belongs to the Dps family.
   
    0.678
EHY70429.1
Peroxiredoxin, OsmC family protein; KEGG: see:SNSL254_A1677 1.7e-69 peroxiredoxin OsmC K04063; Psort location: Cytoplasmic, score: 9.26; locus tag in AE006468 is STM1563; osmC.
  
    0.667
elaB_2
Putative protein ElaB; KEGG: pfo:Pfl01_3969 7.0e-09 vesicle-fusing ATPase; locus tag in AE006468 is STM2311; elaB.
   
    0.657
EHY70432.1
Putative protein bdm; Locus tag in AE006468 is STM1564; yddX.
  
  
 0.541
fbaB
Deoxyribose-phosphate aldolase; KEGG: spt:SPA0711 1.1e-184 fbaB; fructose-bisphosphate aldolase K01623; locus tag in AE006468 is STM2141; fbaB.
   
    0.505
EHY68364.1
Hypothetical protein; KEGG: pfo:Pfl01_3969 2.2e-05 vesicle-fusing ATPase; locus tag in AE006468 is STM2802; ygaM.
   
    0.487
elaB_1
Hypothetical protein; KEGG: pfo:Pfl01_3969 5.5e-09 vesicle-fusing ATPase; locus tag in AE006468 is STM3229; yqjD.
   
    0.479
SBOV10341
Hypothetical protein; KEGG: nph:NP3220A 0.0099 glycerol-3-phosphate cytidyltransferase-like protein; K00980 glycerol-3-phosphate cytidylyltransferase; locus tag in AE006468 is STM1118; yccJ.
   
    0.450
sfcA
Malic enzyme, NAD binding domain protein; KEGG: ses:SARI_01403 3.5e-291 malate dehydrogenase; K00027 malate dehydrogenase (oxaloacetate-decarboxylating); Psort location: CytoplasmicMembrane, score: 9.82; locus tag in AE006468 is STM1566; sfcA.
       0.428
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.