STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHY70463.1Hypothetical protein; KEGG: rsh:Rsph17029_0806 0.0016 ribonuclease; K08300 ribonuclease E; locus tag in AE006468 is STM1593; srfA. (441 aa)    
Predicted Functional Partners:
EHY70464.1
Virulence factor SrfB; Locus tag in AE006468 is STM1594; srfB.
  
 0.998
EHY70465.1
Hypothetical protein; Locus tag in AE006468 is STM1595; srfC.
 
  
 0.977
EHY67191.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52; locus tag in AE006468 is STM4242.
  
     0.766
EHY67295.1
Transcriptional regulator, LuxR family; Locus tag in AE006468 is STM4337; ecnR.
  
     0.759
prn
KEGG: ecx:EcHS_A0437 8.9e-231 outer membrane autotransporter; locus tag in AE006468 is STM0373; yaiU.
  
     0.756
EHY69479.1
DnaJ domain protein; KEGG: pna:Pnap_3263 1.6e-10 exonuclease, RNase T and DNA polymerase III; K02342 DNA polymerase III subunit epsilon; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM0567.
  
     0.755
fliT
Flagellar protein; Dual-function protein that regulates the transcription of class 2 flagellar operons and that also acts as an export chaperone for the filament-capping protein FliD. As a transcriptional regulator, acts as an anti-FlhDC factor; it directly binds FlhC, thus inhibiting the binding of the FlhC/FlhD complex to class 2 promoters, resulting in decreased expression of class 2 flagellar operons. As a chaperone, effects FliD transition to the membrane by preventing its premature polymerization, and by directing it to the export apparatus.
  
     0.740
EHY68093.1
Hypothetical protein; KEGG: bja:blr3367 6.4e-06 cellulase; K01179 endoglucanase; locus tag in AE006468 is STM3799; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.702
flgN
FlgN protein; Psort location: Cytoplasmic, score: 9.26; locus tag in AE006468 is STM1171; flgN.
  
     0.701
EHY70199.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52; locus tag in AE006468 is STM1328.
  
   
 0.698
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.