STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sapDKEGG: rru:Rru_A2359 1.3e-64 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like K12371; Psort location: CytoplasmicMembrane, score: 7.88; locus tag in AE006468 is STM1695; sapD. (330 aa)    
Predicted Functional Partners:
sapB
ABC transporter, permease protein; KEGG: oan:Oant_1583 2.7e-55 alkaline phosphatase K12369; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM1693; sapB.
 
 
 0.999
sapC
Putative dipeptide ABC transporter, permease protein DppC; KEGG: ckl:CKL_1051 4.1e-36 oppC; hypothetical protein K02034; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM1694; sapC.
 
 0.999
sapA
Putative dipeptide ABC transporter, periplasmic dipeptide-binding protein DppA; KEGG: shn:Shewana3_2650 4.3e-119 acetate kinase K02035; Psort location: Periplasmic, score: 10.00; locus tag in AE006468 is STM1692; sapA.
 
 
 0.996
sapF
KEGG: eic:NT01EI_1825 2.8e-108 glutathione import ATP-binding protein GsiA K02032; Psort location: Cytoplasmic, score: 9.12; locus tag in AE006468 is STM1696; sapF.
 
 
0.995
gsiD
Putative dipeptide ABC transporter, permease protein DppC; KEGG: bmi:BMEA_B0781 7.1e-55 nikC; nickel ABC transporter, permease subunit NikC K02034; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM0851; yliD.
 
   
 0.950
dppC
Dipeptide ABC transporter, permease protein DppC; KEGG: ckl:CKL_1051 1.7e-55 oppC; hypothetical protein K02034; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM3628; dppC.
 
   
 0.889
oppC
KEGG: bra:BRADO1095 9.7e-51 oppC; oligopeptide ABC transporter membrane protein K02034; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM1744; oppC.
 
   
 0.848
EHY67945.1
Dipeptide ABC transporter, permease protein DppB; KEGG: ecl:EcolC_0172 1.1e-161 alkaline phosphatase K12369; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM3629; dppB.
 
  
 0.825
gsiC
Glutathione ABC transporter, permease protein GsiC; KEGG: tle:Tlet_0072 1.8e-72 nickel-transporting ATPase K02033; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM0850; yliC.
 
  
  0.809
EHY70128.1
ABC transporter, permease protein; KEGG: efe:EFER_1782 9.3e-149 putative inner membrane nickel transport protein K02033; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM1256.
 
  
  0.788
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.