STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHY70721.1KEGG: vfi:VF_A1001 3.4e-133 agaD; N-acetylgalactosamine-specific enzyme IID component of PTS K02747; Psort location: CytoplasmicMembrane, score: 10.00. (296 aa)    
Predicted Functional Partners:
agaC_2
KEGG: vfi:VF_A1002 2.9e-113 agaC; PTS system, N-acetylgalactosamine-specific IIC component K02746; Psort location: CytoplasmicMembrane, score: 10.00.
 0.995
ptsL_3
PTS system fructose IIA component; KEGG: ses:SARI_01161 5.9e-67 hypothetical protein; K02744 PTS system, N-acetylgalactosamine-specific IIA component; Psort location: Cytoplasmic, score: 9.26.
 
 0.980
EHY70775.1
KEGG: sek:SSPA0973 9.2e-165 PTS system, mannose-specific IIAB component; K02793 PTS system, mannose-specific IIA component K02794; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM1830; manX.
 
 0.978
ptsL_2
KEGG: ses:SARI_01158 4.6e-83 hypothetical protein; K02745 PTS system, N-acetylgalactosamine-specific IIB component; Psort location: Cytoplasmic, score: 9.97.
 
 0.963
agaC_1
KEGG: lsl:LSL_1950 1.9e-29 PTS system, mannose-specific IIC component K02796; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM3770.
 0.933
manY_2
PTS system sorbose-specific iic component; KEGG: eci:UTI89_C2015 3.7e-35 manY; PTS enzyme IIC, mannose-specific K02795; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM0575.
 0.928
EHY70776.1
KEGG: eci:UTI89_C2015 2.6e-128 manY; PTS enzyme IIC, mannose-specific K02795; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM1831; manY.
 0.924
EHY67486.1
PTS system sorbose-specific iic component.
 0.922
EHY67522.1
PTS system sorbose-specific iic component; Locus tag in AE006468 is STM4537.
 0.922
ptsL_5
PTS system fructose IIA component.
 
 0.909
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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