STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ycgLYcgL domain protein; KEGG: hiq:CGSHiGG_01115 2.9e-10 bioD; dithiobiotin synthetase K09902; locus tag in AE006468 is STM1813; ycgL. (82 aa)    
Predicted Functional Partners:
EHY70758.1
FAH family protein; KEGG: sed:SeD_A1505 4.3e-112 hypothetical protein; locus tag in AE006468 is STM1812; ycgM.
  
    0.663
ycgN
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM1811; ycgN; Belongs to the UPF0260 family.
 
     0.655
minC
Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.
  
  
 0.626
EHY70163.1
Hypothetical protein; Locus tag in AE006468 is STM1292; yeaC.
  
     0.596
cysZ
Putative sulfate transport protein CysZ; High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway; Belongs to the CysZ family.
  
     0.578
minE
Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
  
    0.562
hflD
Hypothetical protein; Locus tag in AE006468 is STM1233; ycfC.
  
    0.550
minD
Septum site-determining protein MinD; KEGG: eci:UTI89_C1360 2.1e-133 minD; cell division inhibitor MinD K03609; Psort location: Cytoplasmic, score: 9.12; locus tag in AE006468 is STM1815; minD.
       0.542
yceD
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM1190; yceD.
  
     0.536
yehR
Lipofamily protein; Locus tag in AE006468 is STM2156; yehR.
      
 0.527
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.