STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prcPeptidase; Locus tag in AE006468 is STM1845; prc; Belongs to the peptidase S41A family. (682 aa)    
Predicted Functional Partners:
EHY68873.1
Lipoprotein NlpI; May be involved in cell division.
  
 
 
 0.901
proQ
ProQ activator of osmoprotectant transporter ProP; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities. May regulate ProP activity through an RNA-based, post-transcriptional mechanism. Belongs to the ProQ family.
 
  
 0.834
EHY70791.1
GAF domain protein; Locus tag in AE006468 is STM1847; yebR.
     
 0.699
nifJ
KEGG: sew:SeSA_A1770 0. nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737; Psort location: CytoplasmicMembrane, score: 9.82; locus tag in AE006468 is STM1651; nifJ.
   
   0.690
envC
KEGG: cya:CYA_1627 3.6e-28 M23B family peptidase; Psort location: OuterMembrane, score: 9.93; locus tag in AE006468 is STM3705; yibP.
  
  
 0.585
EHY69879.1
Aminopeptidase; KEGG: see:SNSL254_A1098 0. pepN; aminopeptidase N K01256; Psort location: Cytoplasmic, score: 9.12; locus tag in AE006468 is STM1057; pepN.
    
 0.517
arcB
PAS domain S-box; KEGG: sei:SPC_3398 0. arcB; aerobic respiration control sensor protein; K07648 two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM3328; arcB.
 
  
 0.493
pheT
KEGG: set:SEN1706 0. pheT; phenylalanyl-tRNA synthetase subunit beta K01890; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM1338; pheT.
   
 
 0.486
rseP
RIP metalloprotease RseP; KEGG: seg:SG0227 5.0e-237 yaeL; zinc metallopeptidase RseP; K11749 regulator of sigma E protease; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM0223; yaeL.
 
  
 0.473
htpX
HtpX; Locus tag in AE006468 is STM1844; htpX; Belongs to the peptidase M48B family.
     
 0.466
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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