Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EHY67311.1 | EHY67312.1 | SEHO0A_04432 | SEHO0A_04433 | Putative outer membrane usher protein PapC. | Gram-negative pili assembly chaperone protein. | 0.937 |
EHY67311.1 | EHY70801.1 | SEHO0A_04432 | SEHO0A_01871 | Putative outer membrane usher protein PapC. | Fimbrial protein. | 0.783 |
EHY67311.1 | EHY70803.1 | SEHO0A_04432 | SEHO0A_01873 | Putative outer membrane usher protein PapC. | Gram-negative pili assembly chaperone protein. | 0.934 |
EHY67312.1 | EHY67311.1 | SEHO0A_04433 | SEHO0A_04432 | Gram-negative pili assembly chaperone protein. | Putative outer membrane usher protein PapC. | 0.937 |
EHY67312.1 | EHY67572.1 | SEHO0A_04433 | SEHO0A_04700 | Gram-negative pili assembly chaperone protein. | Putative outer membrane usher protein psac; Locus tag in AE006468 is STM4593; sthB. | 0.868 |
EHY67312.1 | EHY70801.1 | SEHO0A_04433 | SEHO0A_01871 | Gram-negative pili assembly chaperone protein. | Fimbrial protein. | 0.693 |
EHY67312.1 | EHY70802.1 | SEHO0A_04433 | SEHO0A_01872 | Gram-negative pili assembly chaperone protein. | Putative outer membrane usher protein PapC. | 0.885 |
EHY67572.1 | EHY67312.1 | SEHO0A_04700 | SEHO0A_04433 | Putative outer membrane usher protein psac; Locus tag in AE006468 is STM4593; sthB. | Gram-negative pili assembly chaperone protein. | 0.868 |
EHY67572.1 | EHY70801.1 | SEHO0A_04700 | SEHO0A_01871 | Putative outer membrane usher protein psac; Locus tag in AE006468 is STM4593; sthB. | Fimbrial protein. | 0.703 |
EHY67572.1 | EHY70803.1 | SEHO0A_04700 | SEHO0A_01873 | Putative outer membrane usher protein psac; Locus tag in AE006468 is STM4593; sthB. | Gram-negative pili assembly chaperone protein. | 0.869 |
EHY67572.1 | rof | SEHO0A_04700 | SEHO0A_00229 | Putative outer membrane usher protein psac; Locus tag in AE006468 is STM4593; sthB. | Modulator of Rho-dependent transcription termination; Psort location: Cytoplasmic, score: 9.26; locus tag in AE006468 is STM0237; rof. | 0.429 |
EHY70536.1 | EHY70801.1 | SEHO0A_01599 | SEHO0A_01871 | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82; locus tag in AE006468 is STM1646; ydbH. | Fimbrial protein. | 0.708 |
EHY70536.1 | EHY71138.1 | SEHO0A_01599 | SEHO0A_02219 | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82; locus tag in AE006468 is STM1646; ydbH. | AsmA family protein; Locus tag in AE006468 is STM2120; asmA. | 0.891 |
EHY70536.1 | SBOV07541 | SEHO0A_01599 | SEHO0A_00767 | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82; locus tag in AE006468 is STM1646; ydbH. | Hypothetical protein; Locus tag in AE006468 is STM0823; ybiJ. | 0.756 |
EHY70536.1 | ompC_1 | SEHO0A_01599 | SEHO0A_02422 | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82; locus tag in AE006468 is STM1646; ydbH. | Psort location: OuterMembrane, score: 10.00; locus tag in AE006468 is STM2267; ompC; Belongs to the Gram-negative porin family. | 0.685 |
EHY70536.1 | rof | SEHO0A_01599 | SEHO0A_00229 | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82; locus tag in AE006468 is STM1646; ydbH. | Modulator of Rho-dependent transcription termination; Psort location: Cytoplasmic, score: 9.26; locus tag in AE006468 is STM0237; rof. | 0.772 |
EHY70801.1 | EHY67311.1 | SEHO0A_01871 | SEHO0A_04432 | Fimbrial protein. | Putative outer membrane usher protein PapC. | 0.783 |
EHY70801.1 | EHY67312.1 | SEHO0A_01871 | SEHO0A_04433 | Fimbrial protein. | Gram-negative pili assembly chaperone protein. | 0.693 |
EHY70801.1 | EHY67572.1 | SEHO0A_01871 | SEHO0A_04700 | Fimbrial protein. | Putative outer membrane usher protein psac; Locus tag in AE006468 is STM4593; sthB. | 0.703 |
EHY70801.1 | EHY70536.1 | SEHO0A_01871 | SEHO0A_01599 | Fimbrial protein. | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82; locus tag in AE006468 is STM1646; ydbH. | 0.708 |
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