STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHY70825.1Copper resistance protein D; Locus tag in AE006468 is STM1874. (291 aa)    
Predicted Functional Partners:
yobA
Copper resistance protein; Locus tag in AE006468 is STM1875; yobA.
 
  
 0.954
EHY70824.1
Hypothetical protein; Locus tag in AE006468 is STM1873.
 
  
 0.928
EHY68836.1
Hypothetical protein; Locus tag in AE006468 is STM3231; yqjK.
  
     0.761
holE
DNA polymerase III subunit theta; Locus tag in AE006468 is STM1876; holE.
 
     0.719
cpxP
Periplasmic repressor CpxP; Psort location: Periplasmic, score: 10.00; locus tag in AE006468 is STM4060; cpxP.
 
     0.715
SBOV07541
Hypothetical protein; Locus tag in AE006468 is STM0823; ybiJ.
  
     0.699
EHY67368.1
Opacity-associated protein A; Locus tag in AE006468 is STM4396; ytfB.
  
     0.697
SBOV20081
Hypothetical protein; Locus tag in AE006468 is STM1949; yecF.
  
     0.688
EHY69403.1
Primosomal replication protein PriB and priC; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM0481; priC.
  
     0.685
ompX
Hypothetical protein; Psort location: OuterMembrane, score: 10.00; locus tag in AE006468 is STM0833; ompX.
  
     0.668
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.