STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHY70833.1YebG protein; Locus tag in AE006468 is STM1882; yebG. (96 aa)    
Predicted Functional Partners:
SBOV19341
Putative protein YebF; Locus tag in AE006468 is STM1881; yebF.
  
    0.784
sulA
Putative cell division inhibitor SulA; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division.
   
    0.750
tyrA
Chorismate mutase; KEGG: spq:SPAB_03380 6.0e-193 tyrA; bifunctional chorismate mutase/prephenate dehydrogenase; K04092 chorismate mutase K04517; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM2669; tyrA.
  
     0.652
lexA
Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. Binds to the 16 bp palindromic sequence 5'-CTGTATATATATACAG-3'. In the presence of single- stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.
   
  
 0.604
EHY69591.1
Ribbon-helix-helix protein, CopG family; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM0695; ybfE.
  
   
 0.599
EHY67585.1
Acyltransferase; KEGG: vcj:VCD_001501 2.1e-80 1-acyl-sn-glycerol-3-phosphate acyltransferase; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM3998; yihG.
  
     0.598
EHY70608.1
Peptidase S24-like domain protein; KEGG: ses:SARI_01639 2.7e-23 DNA polymerase V subunit UmuD; K03503 DNA polymerase V.
   
  
 0.585
EHY70853.1
Hypothetical protein.
   
  
 0.585
recN
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
   
  
 0.556
flhe
FlhE protein; Locus tag in AE006468 is STM1912; flhE.
  
     0.552
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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