STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHY71149.1ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; KEGG: spq:SPAB_00894 7.5e-250 signal transduction histidine-protein kinase BaeS; K07642 two-component system, OmpR family, sensor histidine kinase BaeS; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM2130; baeS. (467 aa)    
Predicted Functional Partners:
baeR
Response regulator receiver domain protein; KEGG: eci:UTI89_C2354 2.1e-119 baeR; DNA-binding transcriptional regulator BaeR K07664; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM2131; baeR.
 0.999
arcB
PAS domain S-box; KEGG: sei:SPC_3398 0. arcB; aerobic respiration control sensor protein; K07648 two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM3328; arcB.
0.999
barA
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; KEGG: sei:SPC_3015 0. barA; sensor protein; K07678 two-component system, NarL family, sensor histidine kinase BarA; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM2958; barA.
0.998
EHY68118.1
TMAO reductase sytem sensor TorS; KEGG: set:SEN3642 0. torS; hybrid sensory histidine kinase TorS; K07647 two-component system, OmpR family, sensor histidine kinase TorS; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM3826; torS.
0.992
EHY71141.1
PAS domain S-box; KEGG: eci:UTI89_C2343 0. yegE; putative sensor protein; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM2123; yegE.
  
 0.972
EHY71378.1
CheW-like domain protein; KEGG: vfi:VF_A0802 7.7e-42 cheV2; CheW/CheY hybrid protein CheV2 K03415; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM2314.
  
 0.959
mdtA
Efflux transporter, RND family, MFP subunit; KEGG: cco:CCC13826_0687 0.0031 selB; selenocysteine-specific elongation factor SelB; Psort location: CytoplasmicMembrane, score: 9.82; locus tag in AE006468 is STM2126; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 0.921
rcsC
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB.
 
0.915
aer
Aerotaxis receptor; KEGG: eci:UTI89_C3510 9.0e-222 aer; aerotaxis sensor receptor, flavoprotein K03776; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM3217; aer.
  
 0.914
rcsD
Hpt domain protein; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsD is a phosphotransfer intermediate between the sensor kinase RcsC and the response regulator RcsB. It acquires a phosphoryl group from RcsC and transfers it to RcsB.
 
 
 0.911
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.