STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yehYABC transporter, permease protein; KEGG: lwe:lwe1439 9.7e-35 glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein K05845:K05846; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM2164; yehY. (377 aa)    
Predicted Functional Partners:
yehX
ABC transporter, ATP-binding protein; KEGG: bur:Bcep18194_B0497 4.7e-67 ABC proline/glycine betaine transporter, ATPase subunit K05847; Psort location: CytoplasmicMembrane, score: 9.99; locus tag in AE006468 is STM2163; yehX.
 
 0.999
opuBC
ABC transporter, quaternary amine uptake transporter family, substrate-binding protein; KEGG: cvi:CV_4392 2.3e-104 ABC transporter K05845; Psort location: CytoplasmicMembrane, score: 9.97; locus tag in AE006468 is STM2165; yehZ.
 
 0.999
osmX
ABC transporter, quaternary amine uptake transporter family, substrate-binding protein; KEGG: lwe:lwe1443 7.3e-30 opuCC; glycine betaine/L-proline ABC transporter, glycine betaine/L-proline-binding protein K05845; Psort location: CytoplasmicMembrane, score: 9.97; locus tag in AE006468 is STM1493.
 
 0.998
osmV
KEGG: bur:Bcep18194_C7553 1.2e-132 ABC glycine betaine/L-proline transporter, ATPase subunit K05847; Psort location: CytoplasmicMembrane, score: 7.88; locus tag in AE006468 is STM1491.
 
 0.992
EHY71177.1
ABC transporter, permease protein; KEGG: lmf:LMOf2365_1441 8.7e-34 glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein K05845:K05846; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM2162; yehW.
 
 
0.898
EHY67949.1
Hypothetical protein; KEGG: spe:Spro_0065 5.7e-31 outer membrane autotransporter; locus tag in AE006468 is STM3641; yhjY.
      
 0.826
ygaU
LysM domain protein; KEGG: atc:AGR_L_2132 0.0034 5'-nucleotidase; K01081 5'-nucleotidase; Psort location: Periplasmic, score: 9.83; locus tag in AE006468 is STM2795; ygaU.
      
 0.823
EHY70458.1
Transcriptional regulator, GntR family; KEGG: msm:MSMEG_3400 6.5e-08 glutamyl-tRNA(Gln) amidotransferase subunit A K01957; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM1588; yncC.
      
 0.819
EHY70747.1
SpoVR like protein; KEGG: cja:CJA_2562 1.3e-188 SpoVR like family protein; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM1804; ycgB.
   
  
 0.816
EHY67445.1
Alanine dehydrogenase/pyridine nucleotide transhydrogenase; Locus tag in AE006468 is STM4486; yjgB.
   
  
 0.816
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.